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BITS2007 Meeting
BITS2007 Meeting



26-28 April 2007 Napoli, Italy

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Poster Session
Place: Napoli, Italy
Centro Congressi "Federico II"
Via Partenope 36
Napoli
Dates: Friday 27 April 2007 14:00
 
Contribution List 
id down type title presenters board #
100 Poster oneChannelGUI: A Bioconductor graphical interface for single channel microarrays analysis. CALOGERO, Raffaele
107 Poster An information model for the classification of HIV-1 virus inhibitors TORRENS, Francisco
111 Poster Gene Expression database as a tool to identify potentially interesting Oncological Targets BOSOTTI, roberta
113 Poster Synthetic "switches": a new way to tackle complex diseases and biotechnological innovation CUCCATO, Giulia
114 Poster Identification of couples and triples of co-occurring transcription factor binding sites sequences from relative distance and GO filter. PESANDO, igor
116 Poster Identifying networks of estrogen-responsive genes in breast cancer cells ALTOBELLI, Gioia
118 Poster SH3-Hunter: discovery of SH3 domain interaction sites in proteins. FERRARO, Enrico
119 Poster PPNEMA: a database of the RNA cistron from Plant Parasitic nematodes. ATTIMONELLI, Marcella
121 Poster Application of Multivariate Analysis, Support Vector Machines and Artificial Neural Network to the Processing of Nuclear Magnetic Resonance data of olive oil and fish oil samples for classification of geographic origin and discrimination between wild and farm fish. FOLGIERI, Raffaella
126 Poster Bioinformatics and quantum mechanics analysis of tRNA tertiary interactions OLIVA, Romina
127 Poster GENE NETWORK REVERSE ENGINEERING: COMPARISON OF ALGORITHMS BANSAL, Mukesh
128 Poster Construction and analysis of compositionally biased substitution matrices for alignment of Plasmodium spp. proteins BRICK, Kevin
130 Poster Fun&Co: identification of key functional differences in transcriptomes ROSSI, Simona
131 Poster A transcription network simulator DI CAMILLO, Barbara
132 Poster A computationally efficient method for gene network identification LAURIA, Mario
134 Poster A computational analysis of Bacteriorhodopsin and four mutants reveals local conformational changes correlating to changing probabilities in unfolding pathways MARSICO, Annalisa
137 Poster HPC for Aspic: a distributed web resource for alternative splicing prediction and transcript isoform characterization CASTRIGNANO, Tiziana
138 Poster Automatic pedigree reconstruction for genetic studies in isolated populations MILANI, Giuseppe
139 Poster A global expression analysis of the shade avoidance response in Arabidopsis thaliana CIOLFI, Andrea
141 Poster LadderFinder: a tool for allelic ladders CASAGRANDE, Alberto
144 Poster Molecular Dynamics Simulation of the NF-kB Transcription Factor EBERINI, Ivano
146 Poster Incremental classification models and characterization for gene expression data analysis GUARRACINO, Mario Rosario
147 Poster Version VI of the ESTree db: an improved tool for peach transcriptome analysis LAZZARI, Barbara
151 Poster MinSet: automatic derivation of maximally representative subsets of protein structural domains PANDINI, Alessandro
154 Poster A conserved thyroid-specific enhancer in the human and mouse Pax8 locus. ABBONDANTE, Serena
155 Poster Huntington's Disease: From Experimental Results to Interaction Networks, Patho-Pathway Construction and Disease Hypothesis KREMER, Andreas
157 Poster Comparative structural analysis of active site clefts in pancreatic-like ribonucleases MERLINO, Antonello
159 Poster A GMDH type net for the early screening of candidate drugs: the case of alpha-aminoamides GINI, Giuseppina
160 Poster A geometrical model for generating mainly-alpha protein conformations MUCHERINO, Antonio
161 Poster Protein imaging via AFM: a feasibility study. MARANGONI, Roberto
162 Poster Gene marker identification for prognostic prediction of Acute Mieloid Leukemia (AML) from gene expression data. FALCIANO, Francesco
164 Poster Temporal Analysis of Nucleotide Sequence Annotation DALLA, Emiliano
165 Poster An experimental comparison of Random Subspace and Random Projection Ensembles of Support Vector Machines for the classification of gene expression data. FOLGIERI, Raffaella
168 Poster Gene expression annotations and functional statistical analysis of human gene lists MASSEROLI, Marco
173 Poster Biomarker stability of multiresolution proteomic profiling FURLANELLO, Cesare
175 Poster BioInView: a Tool for Integration and Visualization of Heterogeneous Bioinformatics Data Sources ANTONIO, d`Acierno
176 Poster Molecular dynamics of Immunoglobulin transmembrane helix dimerization VARRIALE, Sonia
178 Poster In silico Phosphorylation of the SuperSH3 domain of p47phox AUTORE, Flavia
179 Poster CellExcite: A tool for simulating in-silico Excitable Cells BARTOCCI, Ezio
180 Poster Pharmacogenomics of Weak Drug Effects MIRISOLA, Valentina
181 Poster Semi-automatic and efficient annotation of bioinformatics processors in the biowep workflow enactment portal ROMANO, Paolo
182 Poster SRS implementation of the IARC TP53 Mutation Database ROMANO, Paolo
184 Poster FunClust: Identification of functional motifs in non homologous proteins using multiple local structure comparison. AUSIELLO, Gabriele
185 Poster Virtual screening and structure based drug design of new Fes/Fps kinase domain inhibitors. ROSANO, Camillo
186 Poster IDENTIFICATION OF NEW AP-2ALPHA REGULATED GENES: A BIOLOGICAL AND BIOINFORMATIC APPROACH ORSO, Francesca
187 Poster Ultra Conserved Elements: twofold functions ? GENNARINO, Vincenzo
188 Poster CROSSMiner: a deductive system to discover biological relations LICCIULLI, Flavio
189 Poster Comparative expression analysis of primary tumors and cell lines reveals distinct patterns of expression of membrane-associated protein genes UVA, Paolo
190 Poster Insight into pilus and non-pilus biogenesis from molecular dynamics studies BERISIO, Rita
191 Poster Conformational versatility of N-terminal regions of neurotrophins: a molecular dynamics study PALADINO, Antonella
192 Poster How could the protein-protein complexes be modelled? COSTANTINI, Susan
193 Poster Spatial behavioral modeling and simulation of metabolic pathways with Orion CANNATA, Nicola
194 Poster DrosOCB: a high resolution map of conserved non coding sequences in Drosophila MARTIGNETTI, Loredana
195 Poster CEREALAB database: data integration with the MOMIS System SALA, Antonio
196 Poster ASPIC: a novel bioinformatics tool to investigate the impact of alternative splicing in the expansion of human transcriptome and proteome PESOLE, Graziano
197 Poster Development of a systems biology infrastructure for mathematical modelling and parameter estimation MOSCA, Ettore
198 Poster Generation and analysis of a human-mouse conserved co-expression network ALA, UGO
199 Poster An agent-based model of microRNA-mediated gene regulation: simulation and interpretation of observational data RIPOLI, Andrea
200 Poster Analysis of phosphorylation sites in 3D protein structures VIA, Allegra
201 Poster Classification of co-expressed genes from DNA regulatory regions PAVESI, Giulio
202 Poster Particle tracking software allows to discriminate functionally different vesicles involved in gliadin peptide uptake NANAYAKKARA, Merlin
203 Poster Prediction of new genes and transcriptome survey through an `ab-initio` study of processed pseudogenes. MOLINERIS, Ivan
204 Poster Comparative Genomes Viewer SALES, Gabriele
205 Poster Use of an innovative clustering algorithm to summarize the outcome of genome-wide motif searches FU, Limin
206 Poster Chaotic map clustering on large mixed microarray data sets: modularity and coupled two-ways TULIPANO, Angelica
207 Poster SpectraWEB: A WEB Application for Storing and Retrieving Bacterial MALDI-TOF-MS Spectra DACIERNO, Antonio
208 Poster identification of reliable miRNA targets based on combinatorial miRNA action and integration of different prediction tools RE, angela
209 Poster An Alternative Splicing Predictor in C.Elegans Based on Time Series Analysis CECCARELLI, Michele
210 Poster Protein docking by a combined approach CUBELLIS MARIA, Vittoria
211 Poster Identification of conserved sites in protein folds BORDO, Domenico
212 Poster AFLP Manager: a database to manage and analyze AFLP finger-print profiles CATALANO, Domenico
214 Poster News from EMBnet D`ELIA, Domenica
215 Poster Analysis of UTRs from nuclear-encoded mitochondrial mRNA in Metazoa reveals new insights about molecular mechanisms controlling mitochondrial biogenesis D'ELIA, Domenica
216 Poster A Support Vector Machine for the Discrimination of Coding and Non-Coding Sequences that are Conserved Between Related Genomes. RE`, Matteo
217 Poster A Support Vector Machine for the Discrimination of MicroRNA Precursors from Other Genomic Hairpin Structures PICCOLO, Viviana
218 Poster SWS: accessing SRS sites contents through Web Services ROMANO, Paolo
219 Poster an Approach to Multifactorial Microarray Data Analysis MARATEA, Antonio
220 Poster Characterizing the tomato transcriptome D'AGOSTINO, Nunzio
221 Poster Evolutive constraints for "wiring" and characterizing human subproteomes PERSICO, Maria
222 Poster Data Management and Genome Wide Association Screening ORRO, Alessandro
223 Poster GRID DOCKING SIMULATIONS FOR COMPARATIVE LIGAND BINDING OF NEURAMINIDASE STRUCTURES D'URSI, Pasqualina
225 Poster Critical points in a pathogen bacterial network and their implication for drug discovery. LOGUERCIO, Salvatore
226 Poster A preliminary study on distribution and conservation of MicroRNAs MASELLI, Vincenza
228 Poster From Gene Ontology to Cell Ontology: interoperability among biological knowledge bases CALABRESE, Antonio
229 Poster Conserved elements shape both size and base composition of noncoding regions in Drosophila MENOZZI, Giorgia
231 Poster SHORT SEQUENCE MOTIFS ENRICHED IN 5' UPSTREAM AND UTR REGIONS OF A.THALIANA GENES HOMOLOGOUS TO POTATO HYPER- OR HYPO-EXPRESSED mRNAs UPON HYDRIC STRESS. DE SIMONE, Vincenzo
232 Poster Bayesian inference of transcriptional networks from gene temporal expression patterns DI CAMILLO, Barbara
233 Poster SHORT SEQUENCE MOTIFS ENRICHED IN 5' UPSTREAM AND UTR REGIONS OF HUMAN GENES HYPER- OR HYPO-EXPRESSED UPON STATIN TREATMENT IN FAMILIAL COMBINED HYPERLIPIDEMIA PATIENTS. DE SIMONE, Vincenzo
235 Poster Same action from different scaffolds VENTIMIGLIA, Ilaria
236 Poster The variability of LRR domain of Gro 1 genes in Solanum wild species NUNZIATA, Angelina
237 Poster Evaluation of a novel microarray-based assay for gene expression profiling on formalin-fixed, paraffin embedded (FFPE) tissue samples MUTARELLI, Margherita
238 Poster Time-course whole-genome microarray analysis of estrogen effects on hormone-responsive breast cancer cells MUTARELLI, Margherita
239 Poster Comparative whole-genome microarray analysis of two estrogen-responsive breast cancer cell lines GROBER, Oli` Maria Victoria
240 Poster Correlation between structural properties of promoters and physico-chemical features of Transcription Factors BRILLI, Matteo
241 Poster Histidine biosynthesis: a paradigm for the study of the origin and evolution of metabolic pathways BRILLI, Matteo
242 Poster Identifying Communities structure in paralogous genes BRILLI, Matteo
243 Poster Bioinformatics and experimental characterisation of yeast mitochondrial tRNA mutants responsible of defective phenotypes mirroring human pathologies OLIVA, Romina
MOREA, Veronica
244 Poster Asymmetric Support Vector Machines for gene selection MUSELLI, Marco
245 Poster Gene expression profile of Immature monocyte-derived dendritic cells in response to HIV-1 Virus-Like Particles stimulation. BUONAGURO, Luigi
246 Poster Gene expression analysis of mesothelioma samples CRISPI, stefania
247 Poster Is plant mitochondrial RNA editing a source of phylogenetic incongruence? An answer from in silico and in vivo data sets PICARDI, Ernesto
248 Poster Analysis of Rps19 protein and Rps19 missense mutant proteins interactome CATERINO, Marianna
251 Poster Structural Insights on the oncoprotein Cripto CFC domain and its Alk4 receptor CALVANESE, Luisa
252 Poster Ascidian mitogenomics and the evolution of mitochondrial gene order in Chordata Dr. GRIGGIO, Francesca




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